Protein–RNA interactions for Protein: P04230

H2-Eb1, H-2 class II histocompatibility antigen, E-B beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-Eb1P04230 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.29□□□□□ -0.12
H2-Eb1P04230 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Gm12350-201ENSMUST00000121208 462 ntBASIC14.29□□□□□ -0.12
H2-Eb1P04230 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Gm5479-201ENSMUST00000160578 435 ntBASIC14.29□□□□□ -0.12
H2-Eb1P04230 Gm8584-201ENSMUST00000171982 758 ntBASIC14.29□□□□□ -0.12
H2-Eb1P04230 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Gm27301-201ENSMUST00000184012 127 ntBASIC14.29□□□□□ -0.12
H2-Eb1P04230 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2-Eb1P04230 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.28□□□□□ -0.12
H2-Eb1P04230 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.28□□□□□ -0.12
H2-Eb1P04230 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.28□□□□□ -0.12
H2-Eb1P04230 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2-Eb1P04230 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2-Eb1P04230 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
H2-Eb1P04230 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.27□□□□□ -0.12
H2-Eb1P04230 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
H2-Eb1P04230 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2-Eb1P04230 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
H2-Eb1P04230 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2-Eb1P04230 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2-Eb1P04230 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2-Eb1P04230 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
H2-Eb1P04230 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2-Eb1P04230 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
H2-Eb1P04230 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.27□□□□□ -0.13
H2-Eb1P04230 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Gm10819-201ENSMUST00000099988 561 ntBASIC14.27□□□□□ -0.13
H2-Eb1P04230 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2-Eb1P04230 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H2-Eb1P04230 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms