Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P01852 Mir449b-201ENSMUST00000104833 80 ntBASIC13.18□□□□□ -0.3
P01852 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
P01852 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.18□□□□□ -0.3
P01852 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.18□□□□□ -0.3
P01852 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.18□□□□□ -0.3
P01852 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
P01852 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.18□□□□□ -0.3
P01852 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
P01852 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
P01852 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.18□□□□□ -0.3
P01852 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
P01852 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01852 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P01852 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.17□□□□□ -0.3
P01852 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.17□□□□□ -0.3
P01852 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P01852 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.17□□□□□ -0.3
P01852 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.17□□□□□ -0.3
P01852 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.17□□□□□ -0.3
P01852 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P01852 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.17□□□□□ -0.3
P01852 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.17□□□□□ -0.3
P01852 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P01852 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P01852 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
P01852 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01852 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P01852 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
P01852 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.16□□□□□ -0.3
P01852 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
P01852 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.16□□□□□ -0.3
P01852 Gm18049-201ENSMUST00000208909 581 ntBASIC13.16□□□□□ -0.3
P01852 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P01852 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P01852 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms