Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hcn3O88705 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Hcn3O88705 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.79□□□□□ -0.2
Hcn3O88705 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.79□□□□□ -0.2
Hcn3O88705 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Hcn3O88705 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.79□□□□□ -0.2
Hcn3O88705 Gm6089-201ENSMUST00000197666 938 ntBASIC13.79□□□□□ -0.2
Hcn3O88705 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.79□□□□□ -0.2
Hcn3O88705 Gm18041-201ENSMUST00000218210 618 ntBASIC13.79□□□□□ -0.2
Hcn3O88705 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.79□□□□□ -0.2
Hcn3O88705 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Hcn3O88705 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.79□□□□□ -0.2
Hcn3O88705 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.79□□□□□ -0.2
Hcn3O88705 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.79□□□□□ -0.2
Hcn3O88705 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn3O88705 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.78□□□□□ -0.2
Hcn3O88705 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Hcn3O88705 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.78□□□□□ -0.2
Hcn3O88705 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Hcn3O88705 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.78□□□□□ -0.2
Hcn3O88705 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Gm27646-201ENSMUST00000183989 110 ntBASIC13.78□□□□□ -0.2
Hcn3O88705 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.78□□□□□ -0.2
Hcn3O88705 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.78□□□□□ -0.2
Hcn3O88705 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.78□□□□□ -0.2
Hcn3O88705 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.78□□□□□ -0.2
Hcn3O88705 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn3O88705 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hcn3O88705 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hcn3O88705 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hcn3O88705 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.77□□□□□ -0.2
Hcn3O88705 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hcn3O88705 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.77□□□□□ -0.21
Hcn3O88705 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.77□□□□□ -0.21
Hcn3O88705 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hcn3O88705 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn3O88705 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms