Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trdmt1O55055 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Gm15240-201ENSMUST00000118156 720 ntBASIC15.78■□□□□ 0.12
Trdmt1O55055 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.78■□□□□ 0.12
Trdmt1O55055 Gm27892-201ENSMUST00000185017 106 ntBASIC15.78■□□□□ 0.12
Trdmt1O55055 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.78■□□□□ 0.12
Trdmt1O55055 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trdmt1O55055 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.78■□□□□ 0.12
Trdmt1O55055 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trdmt1O55055 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trdmt1O55055 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trdmt1O55055 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.77■□□□□ 0.12
Trdmt1O55055 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
Trdmt1O55055 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trdmt1O55055 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trdmt1O55055 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.77■□□□□ 0.12
Trdmt1O55055 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.77■□□□□ 0.12
Trdmt1O55055 Gm37714-201ENSMUST00000194742 342 ntBASIC15.77■□□□□ 0.12
Trdmt1O55055 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.77■□□□□ 0.12
Trdmt1O55055 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trdmt1O55055 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trdmt1O55055 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trdmt1O55055 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trdmt1O55055 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trdmt1O55055 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trdmt1O55055 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trdmt1O55055 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trdmt1O55055 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trdmt1O55055 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Trdmt1O55055 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trdmt1O55055 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Trdmt1O55055 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
Trdmt1O55055 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trdmt1O55055 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trdmt1O55055 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trdmt1O55055 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdmt1O55055 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.75■□□□□ 0.11
Trdmt1O55055 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Trdmt1O55055 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.75■□□□□ 0.11
Trdmt1O55055 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.75■□□□□ 0.11
Trdmt1O55055 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Trdmt1O55055 Gm11425-201ENSMUST00000119608 498 ntBASIC15.75■□□□□ 0.11
Trdmt1O55055 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.75■□□□□ 0.11
Trdmt1O55055 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.75■□□□□ 0.11
Trdmt1O55055 Gm18905-201ENSMUST00000205454 928 ntBASIC15.75■□□□□ 0.11
Trdmt1O55055 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trdmt1O55055 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.75■□□□□ 0.11
Trdmt1O55055 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.75■□□□□ 0.11
Trdmt1O55055 Gm9899-201ENSMUST00000065519 555 ntBASIC15.75■□□□□ 0.11
Trdmt1O55055 Gm9396-201ENSMUST00000076703 567 ntBASIC15.75■□□□□ 0.11
Trdmt1O55055 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Gm5356-201ENSMUST00000093326 615 ntBASIC15.75■□□□□ 0.11
Trdmt1O55055 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trdmt1O55055 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms