Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npc1O35604 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npc1O35604 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npc1O35604 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npc1O35604 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npc1O35604 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npc1O35604 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Npc1O35604 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.07□□□□□ -0.16
Npc1O35604 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Npc1O35604 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.07□□□□□ -0.16
Npc1O35604 Gm2451-201ENSMUST00000199447 999 ntBASIC14.07□□□□□ -0.16
Npc1O35604 Gm10290-201ENSMUST00000200451 999 ntBASIC14.07□□□□□ -0.16
Npc1O35604 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.07□□□□□ -0.16
Npc1O35604 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.07□□□□□ -0.16
Npc1O35604 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Npc1O35604 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.07□□□□□ -0.16
Npc1O35604 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npc1O35604 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.06□□□□□ -0.16
Npc1O35604 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Npc1O35604 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Npc1O35604 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Npc1O35604 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Npc1O35604 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.06□□□□□ -0.16
Npc1O35604 AA543401-201ENSMUST00000164248 1269 ntBASIC14.06□□□□□ -0.16
Npc1O35604 Gm9726-201ENSMUST00000180321 678 ntBASIC14.06□□□□□ -0.16
Npc1O35604 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.06□□□□□ -0.16
Npc1O35604 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.06□□□□□ -0.16
Npc1O35604 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Npc1O35604 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Npc1O35604 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Npc1O35604 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npc1O35604 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Npc1O35604 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Npc1O35604 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.05□□□□□ -0.16
Npc1O35604 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.05□□□□□ -0.16
Npc1O35604 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.05□□□□□ -0.16
Npc1O35604 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Gm25144-201ENSMUST00000179561 110 ntBASIC14.05□□□□□ -0.16
Npc1O35604 Gm25352-201ENSMUST00000179815 110 ntBASIC14.05□□□□□ -0.16
Npc1O35604 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.05□□□□□ -0.16
Npc1O35604 Gm5779-201ENSMUST00000218467 910 ntBASIC14.05□□□□□ -0.16
Npc1O35604 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.05□□□□□ -0.16
Npc1O35604 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Npc1O35604 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Npc1O35604 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.05□□□□□ -0.16
Npc1O35604 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Npc1O35604 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Npc1O35604 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npc1O35604 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms