Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
B020004C17RikJ3QP07 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.97■□□□□ 0.15
B020004C17RikJ3QP07 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
B020004C17RikJ3QP07 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
B020004C17RikJ3QP07 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
B020004C17RikJ3QP07 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
B020004C17RikJ3QP07 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
B020004C17RikJ3QP07 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Gm27731-201ENSMUST00000185192 107 ntBASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Gm29649-201ENSMUST00000185649 419 ntBASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Gm6091-201ENSMUST00000098307 165 ntBASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
B020004C17RikJ3QP07 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
B020004C17RikJ3QP07 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
B020004C17RikJ3QP07 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
B020004C17RikJ3QP07 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Gm15371-201ENSMUST00000117057 784 ntBASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Gm42693-201ENSMUST00000196779 631 ntBASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Gm6983-201ENSMUST00000214912 628 ntBASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
B020004C17RikJ3QP07 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Gm8062-201ENSMUST00000139696 444 ntBASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Gm17420-201ENSMUST00000164753 153 ntBASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
B020004C17RikJ3QP07 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms