Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.22□□□□□ -0.45
Gm3727J3QM54 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.22□□□□□ -0.45
Gm3727J3QM54 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Gm9013-201ENSMUST00000132939 882 ntBASIC12.22□□□□□ -0.45
Gm3727J3QM54 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.22□□□□□ -0.45
Gm3727J3QM54 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Grk6-205ENSMUST00000224653 2976 ntBASIC12.22□□□□□ -0.45
Gm3727J3QM54 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3727J3QM54 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Gm4459-201ENSMUST00000118750 468 ntBASIC12.21□□□□□ -0.45
Gm3727J3QM54 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Gm25745-201ENSMUST00000174945 133 ntBASIC12.21□□□□□ -0.45
Gm3727J3QM54 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Gm45328-201ENSMUST00000210942 917 ntBASIC12.21□□□□□ -0.45
Gm3727J3QM54 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Gm3727J3QM54 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.21□□□□□ -0.46
Gm3727J3QM54 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3727J3QM54 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms