Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Gm18905-201ENSMUST00000205454 928 ntBASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Gm18027-201ENSMUST00000218947 619 ntBASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3tc1G3X9F6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Mir1894-201ENSMUST00000122802 81 ntBASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Gm6244-201ENSMUST00000178732 841 ntBASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Gm43630-201ENSMUST00000201550 776 ntBASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Gm17794-201ENSMUST00000220252 955 ntBASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3tc1G3X9F6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3tc1G3X9F6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3tc1G3X9F6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms