Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Gm6550-201ENSMUST00000187574 993 ntBASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.96□□□□□ -0.33
Pcdh1F7BJK1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Pcdh1F7BJK1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh1F7BJK1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Gm11452-201ENSMUST00000122376 690 ntBASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Gm5864-201ENSMUST00000202263 970 ntBASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms