Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Gm15957-201ENSMUST00000118893 974 ntBASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Gm2991-201ENSMUST00000173338 480 ntBASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Gm24514-201ENSMUST00000174961 285 ntBASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Gm38223-201ENSMUST00000194484 695 ntBASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85cE9Q6B2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc85cE9Q6B2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Gm14263-201ENSMUST00000117955 746 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Gm12203-201ENSMUST00000118235 598 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Gm12209-201ENSMUST00000120089 596 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 B9d1os-201ENSMUST00000137010 674 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Gm18473-201ENSMUST00000220543 868 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Gm3222-201ENSMUST00000071282 990 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Gm5161-201ENSMUST00000075243 853 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Snora73a-201ENSMUST00000082453 205 ntBASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc85cE9Q6B2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc85cE9Q6B2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc85cE9Q6B2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc85cE9Q6B2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc85cE9Q6B2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.54■□□□□ 0.4
Ccdc85cE9Q6B2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.54■□□□□ 0.4
Ccdc85cE9Q6B2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc85cE9Q6B2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc85cE9Q6B2 Gm12882-201ENSMUST00000121696 517 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms