Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Gm9229-201ENSMUST00000222777 126 ntBASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Mir7684-201ENSMUST00000183858 60 ntBASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb9E9Q5G2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Pcdhb9E9Q5G2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb9E9Q5G2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Gm15487-201ENSMUST00000122373 465 ntBASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb9E9Q5G2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms