Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cpsf4lE9Q2N0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Mir449b-201ENSMUST00000104833 80 ntBASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Gm14701-201ENSMUST00000117156 348 ntBASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Gm13823-201ENSMUST00000119930 345 ntBASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Gm18766-201ENSMUST00000189811 808 ntBASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Gm10253-201ENSMUST00000194270 940 ntBASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4lE9Q2N0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Gm7774-201ENSMUST00000200064 533 ntBASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Gm5779-201ENSMUST00000218467 910 ntBASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4lE9Q2N0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Gm5867-201ENSMUST00000063197 592 ntBASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms