Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Gm12795-201ENSMUST00000117594 539 ntBASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Gm38210-201ENSMUST00000191944 809 ntBASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Gm8385-201ENSMUST00000058999 643 ntBASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a3E9PWQ3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a3E9PWQ3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a3E9PWQ3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a3E9PWQ3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Col6a3E9PWQ3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Gm38223-201ENSMUST00000194484 695 ntBASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a3E9PWQ3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Gm23218-201ENSMUST00000158124 276 ntBASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Gm13097-201ENSMUST00000210722 397 ntBASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 AA914427-201ENSMUST00000193194 1166 ntBASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.07□□□□□ -0.16
Col6a3E9PWQ3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Gm15131-201ENSMUST00000119124 595 ntBASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Gm6458-201ENSMUST00000211573 635 ntBASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a3E9PWQ3 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms