Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm43416-201ENSMUST00000201916 1015 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm37811-201ENSMUST00000192416 2601 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 AC135469.1-201ENSMUST00000225984 772 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm13611-201ENSMUST00000118269 318 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm25201-201ENSMUST00000083093 170 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm5434-202ENSMUST00000222384 1451 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm5434-201ENSMUST00000071825 1451 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 AC115863.1-201ENSMUST00000214815 1813 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm5112-201ENSMUST00000204407 2368 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm43916-201ENSMUST00000205062 967 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Gm7292-201ENSMUST00000194706 2527 ntBASIC7.41□□□□□ -1.22
Ubr4A2AN08 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ubr4A2AN08 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Gm24548-201ENSMUST00000158650 108 ntBASIC7.4□□□□□ -1.22
Ubr4A2AN08 Gm16379-201ENSMUST00000161469 348 ntBASIC7.4□□□□□ -1.22
Ubr4A2AN08 Gm29651-201ENSMUST00000189088 697 ntBASIC7.4□□□□□ -1.22
Ubr4A2AN08 Gm8762-201ENSMUST00000193486 339 ntBASIC7.4□□□□□ -1.22
Ubr4A2AN08 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 AC022775.2-201ENSMUST00000227885 646 ntBASIC7.4□□□□□ -1.22
Ubr4A2AN08 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Gm5687-201ENSMUST00000118252 640 ntBASIC7.4□□□□□ -1.22
Ubr4A2AN08 Gm11979-201ENSMUST00000119629 743 ntBASIC7.4□□□□□ -1.22
Ubr4A2AN08 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ubr4A2AN08 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms