Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Gm12390-201ENSMUST00000117897 397 ntBASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Gm5356-201ENSMUST00000093326 615 ntBASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Carlr-201ENSMUST00000181515 2574 ntBASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a3A2ACT7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Gm27839-201ENSMUST00000184242 106 ntBASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a3A2ACT7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a3A2ACT7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a3A2ACT7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a3A2ACT7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Gm4804-201ENSMUST00000182234 999 ntBASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a3A2ACT7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms