Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Gm15173-201ENSMUST00000122049 433 ntBASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Gm8584-201ENSMUST00000171982 758 ntBASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Birc2-201ENSMUST00000054878 378 ntBASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-1A0N8R0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12d-1A0N8R0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12d-1A0N8R0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12d-1A0N8R0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Gm27459-201ENSMUST00000184860 107 ntBASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12d-1A0N8R0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms