Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Gm18733-201ENSMUST00000173950 856 ntBASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc194A0A140LIT1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc194A0A140LIT1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc194A0A140LIT1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc194A0A140LIT1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc194A0A140LIT1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Gm5177-201ENSMUST00000183092 997 ntBASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc194A0A140LIT1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms