Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav7n-4A0A075B620 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav7n-4A0A075B620 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Trav7n-4A0A075B620 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav7n-4A0A075B620 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav7n-4A0A075B620 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Gm12497-201ENSMUST00000138778 237 ntBASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-4A0A075B620 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Gm4459-201ENSMUST00000118750 468 ntBASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Gm8584-201ENSMUST00000171982 758 ntBASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-4A0A075B620 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav7n-4A0A075B620 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav7n-4A0A075B620 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav7n-4A0A075B620 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav7n-4A0A075B620 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav7n-4A0A075B620 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav7n-4A0A075B620 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav7n-4A0A075B620 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms