Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Gm16379-201ENSMUST00000161469 348 ntBASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Gm8762-201ENSMUST00000193486 339 ntBASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Gm43947-201ENSMUST00000203019 959 ntBASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Gm8227-201ENSMUST00000223306 571 ntBASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col4a4Q9QZR9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm3890-201ENSMUST00000182416 207 ntBASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm45186-201ENSMUST00000206874 478 ntBASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm5161-201ENSMUST00000075243 853 ntBASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm11964-201ENSMUST00000120982 444 ntBASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm25261-201ENSMUST00000157416 134 ntBASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm22334-201ENSMUST00000158070 133 ntBASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a4Q9QZR9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Gm7809-201ENSMUST00000153199 742 ntBASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Gm16505-201ENSMUST00000179981 232 ntBASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Mir6979-201ENSMUST00000183927 56 ntBASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Gm10608-202ENSMUST00000213924 676 ntBASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms