Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Mir5131-201ENSMUST00000175426 93 ntBASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Gm4899-201ENSMUST00000178708 719 ntBASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lima1Q9ERG0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Mir5126-201ENSMUST00000175513 77 ntBASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Gm15590-201ENSMUST00000078419 552 ntBASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.24□□□□□ -0.13
Lima1Q9ERG0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lima1Q9ERG0 Gm27741-201ENSMUST00000185060 237 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms