Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb3Q9ERD7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb3Q9ERD7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.33□□□□□ -0.11
Tubb3Q9ERD7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb3Q9ERD7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.33□□□□□ -0.11
Tubb3Q9ERD7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb3Q9ERD7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Gm16198-201ENSMUST00000118766 670 ntBASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Gm11745-201ENSMUST00000121669 448 ntBASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Gm8396-201ENSMUST00000057361 823 ntBASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb3Q9ERD7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Gm10154-201ENSMUST00000084445 354 ntBASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb3Q9ERD7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Gm2272-201ENSMUST00000194903 582 ntBASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tubb3Q9ERD7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms