Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Gm14723-201ENSMUST00000118686 215 ntBASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Gm38241-201ENSMUST00000192641 898 ntBASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.7□□□□□ -0.06
Nkx2-4Q9EQM3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Gm43094-201ENSMUST00000196549 921 ntBASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-4Q9EQM3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Gm12384-201ENSMUST00000119228 919 ntBASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Gm18905-201ENSMUST00000205454 928 ntBASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Gm19078-201ENSMUST00000206311 727 ntBASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Gm18054-201ENSMUST00000207539 555 ntBASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Gm45880-201ENSMUST00000213041 853 ntBASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-4Q9EQM3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Gm15240-201ENSMUST00000118156 720 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms