Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Gm9013-201ENSMUST00000132939 882 ntBASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Gm6345-202ENSMUST00000180900 204 ntBASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmg20aQ9DC33 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hmg20aQ9DC33 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmg20aQ9DC33 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Gm5587-201ENSMUST00000206270 674 ntBASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.16□□□□□ -0.3
Hmg20aQ9DC33 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms