Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 BC001981-202ENSMUST00000191393 1545 ntBASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.09□□□□□ -0.15
Rrp8Q9DB85 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Gm15806-201ENSMUST00000120696 955 ntBASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.09□□□□□ -0.15
Rrp8Q9DB85 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rrp8Q9DB85 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rrp8Q9DB85 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Rrp8Q9DB85 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rrp8Q9DB85 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Gm13829-201ENSMUST00000119600 138 ntBASIC14.08□□□□□ -0.16
Rrp8Q9DB85 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.08□□□□□ -0.16
Rrp8Q9DB85 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rrp8Q9DB85 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.07□□□□□ -0.16
Rrp8Q9DB85 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp8Q9DB85 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms