Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc7Q9D541 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc7Q9D541 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc7Q9D541 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc7Q9D541 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc7Q9D541 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc7Q9D541 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc7Q9D541 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Gm12882-201ENSMUST00000121696 517 ntBASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc7Q9D541 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc7Q9D541 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms