Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Gm7774-201ENSMUST00000200064 533 ntBASIC15.32■□□□□ 0.04
Gm3404Q9D506 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm3404Q9D506 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3404Q9D506 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Gm3404Q9D506 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.31■□□□□ 0.04
Gm3404Q9D506 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Gm25287-201ENSMUST00000103846 110 ntBASIC15.31■□□□□ 0.04
Gm3404Q9D506 Gm22918-201ENSMUST00000103855 110 ntBASIC15.31■□□□□ 0.04
Gm3404Q9D506 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm3404Q9D506 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3404Q9D506 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Gm9824-201ENSMUST00000178707 561 ntBASIC15.3■□□□□ 0.04
Gm3404Q9D506 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.3■□□□□ 0.04
Gm3404Q9D506 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.3■□□□□ 0.04
Gm3404Q9D506 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm3404Q9D506 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.3■□□□□ 0.04
Gm3404Q9D506 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3404Q9D506 Gm22065-201ENSMUST00000103753 110 ntBASIC15.29■□□□□ 0.04
Gm3404Q9D506 Gm22066-201ENSMUST00000103761 110 ntBASIC15.29■□□□□ 0.04
Gm3404Q9D506 Gm24932-201ENSMUST00000103763 110 ntBASIC15.29■□□□□ 0.04
Gm3404Q9D506 Gm24115-201ENSMUST00000103799 110 ntBASIC15.29■□□□□ 0.04
Gm3404Q9D506 Gm22190-201ENSMUST00000103827 110 ntBASIC15.29■□□□□ 0.04
Gm3404Q9D506 Gm22191-201ENSMUST00000103831 110 ntBASIC15.29■□□□□ 0.04
Gm3404Q9D506 Gm24721-201ENSMUST00000103849 110 ntBASIC15.29■□□□□ 0.04
Gm3404Q9D506 Gm28018-201ENSMUST00000103869 110 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms