Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stag1Q9D3E6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stag1Q9D3E6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stag1Q9D3E6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
Stag1Q9D3E6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Stag1Q9D3E6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stag1Q9D3E6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.15■□□□□ 0.34
Stag1Q9D3E6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stag1Q9D3E6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Stag1Q9D3E6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stag1Q9D3E6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Stag1Q9D3E6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Gm33320-201ENSMUST00000192232 530 ntBASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Gm9797-201ENSMUST00000052902 613 ntBASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stag1Q9D3E6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Gm12585-201ENSMUST00000117307 290 ntBASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Gm10766-202ENSMUST00000194123 606 ntBASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stag1Q9D3E6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Gm15460-201ENSMUST00000118147 391 ntBASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Gm6180-201ENSMUST00000065243 498 ntBASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stag1Q9D3E6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms