Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Gm14042-201ENSMUST00000120139 833 ntBASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Gm6623-201ENSMUST00000173570 544 ntBASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Gm10499-201ENSMUST00000174094 934 ntBASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Mir7071-201ENSMUST00000184847 69 ntBASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Gm18622-201ENSMUST00000219361 595 ntBASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33aQ9D2N9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.28■□□□□ 0.04
Vps33aQ9D2N9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Gm13836-201ENSMUST00000121159 501 ntBASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.27■□□□□ 0.04
Vps33aQ9D2N9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps33aQ9D2N9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.26■□□□□ 0.03
Vps33aQ9D2N9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms