Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Gm9726-201ENSMUST00000180321 678 ntBASIC12.04□□□□□ -0.48
Ssbp3Q9D032 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssbp3Q9D032 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Gm8749-201ENSMUST00000117737 331 ntBASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Gm6415-201ENSMUST00000118488 348 ntBASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ssbp3Q9D032 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ssbp3Q9D032 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ssbp3Q9D032 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ssbp3Q9D032 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ssbp3Q9D032 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ssbp3Q9D032 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ssbp3Q9D032 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ssbp3Q9D032 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ssbp3Q9D032 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.02□□□□□ -0.48
Ssbp3Q9D032 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ssbp3Q9D032 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Gm15693-201ENSMUST00000120470 637 ntBASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.02□□□□□ -0.49
Ssbp3Q9D032 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ssbp3Q9D032 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms