Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Gm18669-201ENSMUST00000216049 778 ntBASIC14.31□□□□□ -0.12
Ssu72Q9CY97 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssu72Q9CY97 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Gm25925-201ENSMUST00000158314 306 ntBASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Gm10275-202ENSMUST00000168697 495 ntBASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Gm6550-201ENSMUST00000187574 993 ntBASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Gm10275-201ENSMUST00000092620 635 ntBASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssu72Q9CY97 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms