Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn1Q9CWM4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn1Q9CWM4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.65□□□□□ -0.39
Pfdn1Q9CWM4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pfdn1Q9CWM4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms