Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Gm4081-201ENSMUST00000195287 1838 ntBASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Gm9172-201ENSMUST00000212092 954 ntBASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Grk6-205ENSMUST00000224653 2976 ntBASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Gm29361-201ENSMUST00000183323 2000 ntBASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rpl39lQ9CQD0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rpl39lQ9CQD0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Rpl39lQ9CQD0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rpl39lQ9CQD0 Gm14451-201ENSMUST00000121581 1542 ntBASIC9.36□□□□□ -0.91
Rpl39lQ9CQD0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rpl39lQ9CQD0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rpl39lQ9CQD0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms