Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Mir6990-201ENSMUST00000183724 91 ntBASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rpa3Q9CQ71 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa3Q9CQ71 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Gm44335-201ENSMUST00000196879 141 ntBASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Gm44297-201ENSMUST00000198304 141 ntBASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Gm44346-201ENSMUST00000198851 141 ntBASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Gm43125-201ENSMUST00000201724 730 ntBASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Chchd1-203ENSMUST00000224633 557 ntBASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa3Q9CQ71 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.23■□□□□ 0.03
Rpa3Q9CQ71 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms