Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Gm5479-201ENSMUST00000160578 435 ntBASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.81□□□□□ -0.52
H2afb1Q9CQ70 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Gm37230-201ENSMUST00000194491 818 ntBASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb1Q9CQ70 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Gm9385-201ENSMUST00000117563 472 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms