Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mir1895-201ENSMUST00000122615 79 ntBASIC14.33□□□□□ -0.12
Trim33Q99PP7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
Trim33Q99PP7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trim33Q99PP7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.33□□□□□ -0.12
Trim33Q99PP7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.32□□□□□ -0.12
Trim33Q99PP7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Gm8749-201ENSMUST00000117737 331 ntBASIC14.32□□□□□ -0.12
Trim33Q99PP7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.32□□□□□ -0.12
Trim33Q99PP7 Gm2451-201ENSMUST00000199447 999 ntBASIC14.32□□□□□ -0.12
Trim33Q99PP7 Gm10290-201ENSMUST00000200451 999 ntBASIC14.32□□□□□ -0.12
Trim33Q99PP7 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.32□□□□□ -0.12
Trim33Q99PP7 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.32□□□□□ -0.12
Trim33Q99PP7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim33Q99PP7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim33Q99PP7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.31□□□□□ -0.12
Trim33Q99PP7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim33Q99PP7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms