Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Gm13823-201ENSMUST00000119930 345 ntBASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gtf2ird2Q99NI3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gtf2ird2Q99NI3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Gtf2ird2Q99NI3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gtf2ird2Q99NI3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gtf2ird2Q99NI3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
Gtf2ird2Q99NI3 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.83□□□□□ -0.03
Gtf2ird2Q99NI3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gtf2ird2Q99NI3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gtf2ird2Q99NI3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm9719-201ENSMUST00000162765 543 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm29310-201ENSMUST00000185468 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21825-201ENSMUST00000185728 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm29109-201ENSMUST00000185895 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21896-201ENSMUST00000186520 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21873-201ENSMUST00000186728 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21794-201ENSMUST00000187056 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21880-201ENSMUST00000187275 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21826-201ENSMUST00000187451 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm28630-201ENSMUST00000187806 498 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21198-201ENSMUST00000188393 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21749-201ENSMUST00000189343 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21901-201ENSMUST00000189568 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm29424-201ENSMUST00000189716 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm28599-201ENSMUST00000189838 694 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21867-201ENSMUST00000189917 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm29269-201ENSMUST00000190087 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21722-201ENSMUST00000190153 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm28423-201ENSMUST00000190701 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21899-201ENSMUST00000190745 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21910-201ENSMUST00000191163 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21849-201ENSMUST00000191571 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm28678-201ENSMUST00000191593 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm20910-201ENSMUST00000193268 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 Gm21871-201ENSMUST00000194621 696 ntBASIC14.82□□□□□ -0.04
Gtf2ird2Q99NI3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms