Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.06□□□□□ -0.16
Msh4Q99MT2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.06□□□□□ -0.16
Msh4Q99MT2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msh4Q99MT2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Gm14701-201ENSMUST00000117156 348 ntBASIC14.05□□□□□ -0.16
Msh4Q99MT2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Gm44335-201ENSMUST00000196879 141 ntBASIC14.05□□□□□ -0.16
Msh4Q99MT2 Gm44297-201ENSMUST00000198304 141 ntBASIC14.05□□□□□ -0.16
Msh4Q99MT2 Gm44346-201ENSMUST00000198851 141 ntBASIC14.05□□□□□ -0.16
Msh4Q99MT2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.05□□□□□ -0.16
Msh4Q99MT2 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.05□□□□□ -0.16
Msh4Q99MT2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh4Q99MT2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Msh4Q99MT2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh4Q99MT2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh4Q99MT2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msh4Q99MT2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh4Q99MT2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msh4Q99MT2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh4Q99MT2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh4Q99MT2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.03□□□□□ -0.16
Msh4Q99MT2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Msh4Q99MT2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.03□□□□□ -0.16
Msh4Q99MT2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Msh4Q99MT2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msh4Q99MT2 Gm18889-201ENSMUST00000174284 929 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 190.7 ms