Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Gm5363-201ENSMUST00000211927 938 ntBASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Gm9229-201ENSMUST00000222777 126 ntBASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col25a1Q99MQ5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Gm13342-201ENSMUST00000121055 207 ntBASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Gm8652-201ENSMUST00000181363 964 ntBASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Gm43758-201ENSMUST00000199500 367 ntBASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col25a1Q99MQ5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Rps4l-202ENSMUST00000204242 789 ntBASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col25a1Q99MQ5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Gm12384-201ENSMUST00000119228 919 ntBASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Gm22334-201ENSMUST00000158070 133 ntBASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Gm27631-201ENSMUST00000184163 466 ntBASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Gm29649-201ENSMUST00000185649 419 ntBASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.88□□□□□ -0.03
Col25a1Q99MQ5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms