Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Gm24694-201ENSMUST00000180054 110 ntBASIC12.66□□□□□ -0.38
Scrt1Q99M85 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Gm27663-201ENSMUST00000184839 110 ntBASIC12.66□□□□□ -0.38
Scrt1Q99M85 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.66□□□□□ -0.38
Scrt1Q99M85 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.65□□□□□ -0.38
Scrt1Q99M85 Gm8602-201ENSMUST00000184045 607 ntBASIC12.65□□□□□ -0.38
Scrt1Q99M85 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Gm9908-201ENSMUST00000211534 448 ntBASIC12.65□□□□□ -0.38
Scrt1Q99M85 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.65□□□□□ -0.38
Scrt1Q99M85 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.65□□□□□ -0.38
Scrt1Q99M85 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Scrt1Q99M85 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Gm11478-201ENSMUST00000117851 599 ntBASIC12.64□□□□□ -0.39
Scrt1Q99M85 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.64□□□□□ -0.39
Scrt1Q99M85 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.64□□□□□ -0.39
Scrt1Q99M85 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scrt1Q99M85 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.64□□□□□ -0.39
Scrt1Q99M85 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scrt1Q99M85 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scrt1Q99M85 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scrt1Q99M85 Gm24543-201ENSMUST00000103867 82 ntBASIC12.63□□□□□ -0.39
Scrt1Q99M85 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms