Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Gm27680-201ENSMUST00000184192 160 ntBASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha2Q91Y17 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdha2Q91Y17 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha2Q91Y17 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha2Q91Y17 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha2Q91Y17 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha2Q91Y17 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Gm13453-201ENSMUST00000118708 357 ntBASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Gm17837-201ENSMUST00000186435 985 ntBASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Gm10576-201ENSMUST00000191927 825 ntBASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha2Q91Y17 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Gm27306-201ENSMUST00000183970 107 ntBASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.32■□□□□ 0.04
Pcdha2Q91Y17 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha2Q91Y17 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha2Q91Y17 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha2Q91Y17 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha2Q91Y17 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms