Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Gm45114-201ENSMUST00000208280 1349 ntBASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Gm27920-201ENSMUST00000183953 96 ntBASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 AC134439.1-201ENSMUST00000220923 600 ntBASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb20Q91XZ9 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Gm17063-201ENSMUST00000168135 456 ntBASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Gm9499-201ENSMUST00000180888 964 ntBASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Gm44237-201ENSMUST00000205183 936 ntBASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb20Q91XZ9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdhb20Q91XZ9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdhb20Q91XZ9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdhb20Q91XZ9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdhb20Q91XZ9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms