Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Gm13418-201ENSMUST00000119097 944 ntBASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Birc2-201ENSMUST00000054878 378 ntBASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.94□□□□□ -0.18
Pcdh18Q8VHR0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh18Q8VHR0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdh18Q8VHR0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms