Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Gm17807-201ENSMUST00000186869 298 ntBASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Rpa1Q8VEE4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Gm15372-201ENSMUST00000120729 834 ntBASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rpa1Q8VEE4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms