Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Gm27920-201ENSMUST00000183953 96 ntBASIC13.37□□□□□ -0.27
Rfc3Q8R323 Gm27430-201ENSMUST00000184585 107 ntBASIC13.37□□□□□ -0.27
Rfc3Q8R323 Gm38225-201ENSMUST00000194001 393 ntBASIC13.37□□□□□ -0.27
Rfc3Q8R323 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Gm44333-201ENSMUST00000197168 107 ntBASIC13.37□□□□□ -0.27
Rfc3Q8R323 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfc3Q8R323 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Gm2810-201ENSMUST00000118681 990 ntBASIC13.36□□□□□ -0.27
Rfc3Q8R323 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.36□□□□□ -0.27
Rfc3Q8R323 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.36□□□□□ -0.27
Rfc3Q8R323 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc3Q8R323 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Gm25287-201ENSMUST00000103846 110 ntBASIC13.35□□□□□ -0.27
Rfc3Q8R323 Gm22918-201ENSMUST00000103855 110 ntBASIC13.35□□□□□ -0.27
Rfc3Q8R323 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfc3Q8R323 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc3Q8R323 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms