Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Gm13689-201ENSMUST00000119360 685 ntBASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Gm13829-201ENSMUST00000119600 138 ntBASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vopp1Q8R1C3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Gm11524-201ENSMUST00000119349 807 ntBASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Gm9002-201ENSMUST00000178437 499 ntBASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Gm44719-201ENSMUST00000206404 149 ntBASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vopp1Q8R1C3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vopp1Q8R1C3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Vopp1Q8R1C3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.08■□□□□ 0.01
Vopp1Q8R1C3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vopp1Q8R1C3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Vopp1Q8R1C3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
Vopp1Q8R1C3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms