Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Gm11950-201ENSMUST00000121615 838 ntBASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ebf4Q8K4J2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ebf4Q8K4J2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ebf4Q8K4J2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Gm9726-201ENSMUST00000180321 678 ntBASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf4Q8K4J2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Gm5587-201ENSMUST00000206270 674 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms