Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm29310-201ENSMUST00000185468 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21825-201ENSMUST00000185728 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm29109-201ENSMUST00000185895 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21896-201ENSMUST00000186520 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21873-201ENSMUST00000186728 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21794-201ENSMUST00000187056 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21880-201ENSMUST00000187275 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21826-201ENSMUST00000187451 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21198-201ENSMUST00000188393 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21749-201ENSMUST00000189343 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21901-201ENSMUST00000189568 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm29424-201ENSMUST00000189716 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm28599-201ENSMUST00000189838 694 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21867-201ENSMUST00000189917 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm29269-201ENSMUST00000190087 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21722-201ENSMUST00000190153 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm28423-201ENSMUST00000190701 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21899-201ENSMUST00000190745 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21910-201ENSMUST00000191163 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21849-201ENSMUST00000191571 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm28678-201ENSMUST00000191593 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm20910-201ENSMUST00000193268 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm21871-201ENSMUST00000194621 696 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gm8396-201ENSMUST00000057361 823 ntBASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn1Q8K0T0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Gm24158-201ENSMUST00000175263 71 ntBASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn1Q8K0T0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Gm29541-201ENSMUST00000191351 678 ntBASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn1Q8K0T0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms