Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CopaQ8CIE6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CopaQ8CIE6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm22065-201ENSMUST00000103753 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm22066-201ENSMUST00000103761 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm24932-201ENSMUST00000103763 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm24115-201ENSMUST00000103799 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm22190-201ENSMUST00000103827 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm22191-201ENSMUST00000103831 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm24721-201ENSMUST00000103849 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm28018-201ENSMUST00000103869 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm26399-201ENSMUST00000103937 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm6973-201ENSMUST00000117080 721 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm16026-204ENSMUST00000162652 683 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm25349-201ENSMUST00000177728 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm23616-201ENSMUST00000177797 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm25871-201ENSMUST00000177816 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm24752-201ENSMUST00000178240 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm24496-201ENSMUST00000178287 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm25649-201ENSMUST00000178476 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm25548-201ENSMUST00000178681 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm23147-201ENSMUST00000178841 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm26095-201ENSMUST00000179270 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm22171-201ENSMUST00000179283 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm23936-201ENSMUST00000179354 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm22619-201ENSMUST00000179516 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm25255-201ENSMUST00000179579 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm24755-201ENSMUST00000179691 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm26506-201ENSMUST00000179692 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm25086-201ENSMUST00000179931 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm23243-201ENSMUST00000180047 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm24659-201ENSMUST00000180212 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm24169-201ENSMUST00000180244 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm23689-201ENSMUST00000180354 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm27359-201ENSMUST00000184153 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm27785-201ENSMUST00000184268 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm27466-201ENSMUST00000184396 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm27703-201ENSMUST00000184836 110 ntBASIC14.73□□□□□ -0.05
CopaQ8CIE6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CopaQ8CIE6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms