Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ShfQ8CG80 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Gm10275-202ENSMUST00000168697 495 ntBASIC12.87□□□□□ -0.35
ShfQ8CG80 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.87□□□□□ -0.35
ShfQ8CG80 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Gm10275-201ENSMUST00000092620 635 ntBASIC12.87□□□□□ -0.35
ShfQ8CG80 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ShfQ8CG80 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ShfQ8CG80 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
ShfQ8CG80 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.86□□□□□ -0.35
ShfQ8CG80 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ShfQ8CG80 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ShfQ8CG80 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Gm12350-201ENSMUST00000121208 462 ntBASIC12.86□□□□□ -0.35
ShfQ8CG80 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.86□□□□□ -0.35
ShfQ8CG80 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.86□□□□□ -0.35
ShfQ8CG80 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ShfQ8CG80 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ShfQ8CG80 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ShfQ8CG80 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.86□□□□□ -0.35
ShfQ8CG80 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.86□□□□□ -0.35
ShfQ8CG80 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ShfQ8CG80 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.85□□□□□ -0.35
ShfQ8CG80 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ShfQ8CG80 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.85□□□□□ -0.35
ShfQ8CG80 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ShfQ8CG80 Gm27301-201ENSMUST00000184012 127 ntBASIC12.85□□□□□ -0.35
ShfQ8CG80 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.85□□□□□ -0.35
ShfQ8CG80 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ShfQ8CG80 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.85□□□□□ -0.35
ShfQ8CG80 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ShfQ8CG80 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ShfQ8CG80 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ShfQ8CG80 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
ShfQ8CG80 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms