Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smc5Q8CG46 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.83■□□□□ 0.44
Smc5Q8CG46 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.83■□□□□ 0.44
Smc5Q8CG46 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc5Q8CG46 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc5Q8CG46 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc5Q8CG46 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc5Q8CG46 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Smc5Q8CG46 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc5Q8CG46 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Smc5Q8CG46 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.82■□□□□ 0.44
Smc5Q8CG46 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Gm10819-201ENSMUST00000099988 561 ntBASIC17.82■□□□□ 0.44
Smc5Q8CG46 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc5Q8CG46 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Gm28659-201ENSMUST00000188013 759 ntBASIC17.81■□□□□ 0.44
Smc5Q8CG46 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.81■□□□□ 0.44
Smc5Q8CG46 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smc5Q8CG46 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.8■□□□□ 0.44
Smc5Q8CG46 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.8■□□□□ 0.44
Smc5Q8CG46 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.8■□□□□ 0.44
Smc5Q8CG46 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.8■□□□□ 0.44
Smc5Q8CG46 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smc5Q8CG46 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.79■□□□□ 0.44
Smc5Q8CG46 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.79■□□□□ 0.44
Smc5Q8CG46 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.79■□□□□ 0.44
Smc5Q8CG46 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms